Summer 2019 Roadmap

[ha0ye]

Gather and finalize processing of existing datasets

• BioTime Add BioTime database functions #116
• Popler Add code for processing datasets from Popler #95
• BBS data wrangling BBS data wrangling functions #59
• Yenni et al. 2017 Add datasets from Yenni, Adler, Ernest 2017 #119
• Compile listing of datasets Compile list of datasets, locations, included covariates and metadata #123

Infrastructure

• Plan automation for MATSS workflows Plan automation for MATSS workflows #118
• Test and merge in summary stats function Complete merger of summary stats functions #117
• Template functionality for deploying a MATSS project Function to generate a template Rmarkdown report #73
• general data processing utilities Data post-processing functions (general utilities for analyses) #96, Update code and tests for check_data_format #97

Misc:

• cache management Functions to manage drake cache location #66
• document adding new datasets Document workflow for contributing new data #77
• document Maizuru dataset document Maizuru dataset #60
• check Portal rodent data Add checks for portal rodent data #14
• environmental variable handling Add checks for portalr data path #88, Allow per-project files to set data path locations (and other environmental variables?) #106
• retriever interface testing Enable testing of retriever interface functions on Travis CI #93, Trying docker #94, Travis fails to install rdataretriever #108