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sviatkh/README.md

Hi 👋, I'm Sviat Kharuk!

I'm a bioinformatics researcher at EMBL, working on single-cell transcriptomics and RNA velocity. I hold a master's in biochemistry, with a thesis on RNA velocity in Drosophila perturbation data completed during an internship at EMBL. My work focuses on understanding cellular dynamics through computational analysis of high-dimensional data.

Languages and Tools I Use

⚡️ Where to find me

LinkedIn Profile

You can visit my webpage for more information: sviatkh.github.io

sviatkh

sviatkh

Pinned Loading

  1. scverse/rapids-singlecell scverse/rapids-singlecell Public

    rapids-singlecell: GPU-accelerated framework for scRNA analysis

    Python 359 43

  2. master-thesis-RNA-velocity master-thesis-RNA-velocity Public

    Jupyter Notebook

  3. biocontext-ai/registry biocontext-ai/registry Public

    The BioContextAI Registry for biomedical MCP servers

    Python 21 16

  4. spatial-transcriptomics-project spatial-transcriptomics-project Public

    Capstone project was performed during the course "Introduction to R and RNA sequencing". https://sviatkh.github.io/spatial-transcriptomics-project/

    Jupyter Notebook

  5. flybase-mcp-server flybase-mcp-server Public

    MCP server for FlyBase integration

    Python

  6. Huber-group-EMBL/Brillouin-validation Huber-group-EMBL/Brillouin-validation Public

    Validation of Brillouin standard file format (`.brim`)

    Python